I'll try to remember to get a measurement when I get home from work. I had basically the same problem with mine when I replaced my top. Measure the pocket distances on the underside of the top to get the middle bows spacing. There should be a bit of play in the pocket to allow you to finagle it a bit. You can also get a relatively close measurement between the rear bow and the "second" one by measuring the pocket to the split that is stapled to the rear bow. Here's one of my past posts on how I did it
http://tffn.net/phpBB3/viewtopic.php?f=8&t=18330Good luck and I'll try to remember to get a measurement from my car for you. Shoot me a PM if I don't reply. Memory isn't what it used to be...
Edit: Here's the measurements off my car. For clarification I'll call the next bow forward from the rear bow the 2nd bow, then the 1st bow will follow...
Rear bow to 2nd bow is 16 3/8" centerline. 2nd bow to 1st bow is 18 1/8" centerline. The header bow is whatever is required to latch to the front and will change on each vehicle. These measurements may be a bit off on your top as the frame may be adjusted slightly different than mine. I'm not sure how much of an effect the adjustments would have on the bow positioning. In the end, you'll be stapling and removing the pads (and possibly the top) around a few times until you get it just right. For the header bow, I placed a balled up rag under the top frame to lift it slightly so that I could stretch the top and then mark it with chalk. I then stapled the top with the chalk mark right at the edge of the header bow and that caused the top to stretch just the right amount to get rid of the wrinkles.